From 4565ea504033e49e9fa017b0aaf72b1b0f8f33e9 Mon Sep 17 00:00:00 2001
From: nf-core-bot <core@nf-co.re>
Date: Tue, 13 Jul 2021 15:29:21 +0000
Subject: [PATCH] Template update for nf-core/tools version 2.0.1
---
.github/workflows/linting.yml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/.github/workflows/linting.yml b/.github/workflows/linting.yml
index 13b4fc8..fbde5cf 100644
--- a/.github/workflows/linting.yml
+++ b/.github/workflows/linting.yml
@@ -127,7 +127,7 @@ jobs:
GITHUB_COMMENTS_URL: ${{ github.event.pull_request.comments_url }}
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
GITHUB_PR_COMMIT: ${{ github.event.pull_request.head.sha }}
- run: nf-core -l lint_log.txt lint ${GITHUB_WORKSPACE} --markdown lint_results.md
+ run: nf-core -l lint_log.txt lint --dir ${GITHUB_WORKSPACE} --markdown lint_results.md
- name: Save PR number
if: ${{ always() }}
--
GitLab