diff --git a/Dockerfile b/Dockerfile index 4d28385b74a7fd65cebe0848cd39097a9518864a..490ee3637819dd1ba8028a9d57e978fb794b1f2a 100644 --- a/Dockerfile +++ b/Dockerfile @@ -2,6 +2,9 @@ FROM nfcore/base LABEL authors="Nicolas Servant" \ description="Docker image containing all requirements for nf-core/hic pipeline" +## Install gcc for pip iced install +RUN apt-get update && apt-get install -y gcc g++ && apt-get clean -y + COPY environment.yml / RUN conda env create -f /environment.yml && conda clean -a ENV PATH /opt/conda/envs/nf-core-hic-1.0dev/bin:$PATH