From 3634558e8e163c185674cf3bb0cc01838db24462 Mon Sep 17 00:00:00 2001
From: Phil Ewels <phil.ewels@scilifelab.se>
Date: Thu, 5 Nov 2020 11:11:20 +0100
Subject: [PATCH] nf-core bump versions to pipeline version 1.3dev
---
.github/workflows/ci.yml | 4 ++--
CHANGELOG.md | 2 +-
Dockerfile | 4 ++--
environment.yml | 2 +-
nextflow.config | 4 ++--
5 files changed, 8 insertions(+), 8 deletions(-)
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index a8a8ba5..896e2ae 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -34,13 +34,13 @@ jobs:
- name: Build new docker image
if: env.GIT_DIFF
- run: docker build --no-cache . -t nfcore/hic:1.2.2
+ run: docker build --no-cache . -t nfcore/hic:dev
- name: Pull docker image
if: ${{ !env.GIT_DIFF }}
run: |
docker pull nfcore/hic:dev
- docker tag nfcore/hic:dev nfcore/hic:1.2.2
+ docker tag nfcore/hic:dev nfcore/hic:dev
- name: Install Nextflow
run: |
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 201b5c9..91e2840 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -3,7 +3,7 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
-## v1.2.3dev
+## v1.3dev
* Template update for nf-core/tools v1.11
diff --git a/Dockerfile b/Dockerfile
index 70ba2d7..ea66370 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -9,10 +9,10 @@ COPY environment.yml /
RUN conda env create --quiet -f /environment.yml && conda clean -a
# Add conda installation dir to PATH (instead of doing 'conda activate')
-ENV PATH /opt/conda/envs/nf-core-hic-1.2.2/bin:$PATH
+ENV PATH /opt/conda/envs/nf-core-hic-1.3dev/bin:$PATH
# Dump the details of the installed packages to a file for posterity
-RUN conda env export --name nf-core-hic-1.2.2 > nf-core-hic-1.2.2.yml
+RUN conda env export --name nf-core-hic-1.3dev > nf-core-hic-1.3dev.yml
# Instruct R processes to use these empty files instead of clashing with a local version
RUN touch .Rprofile
diff --git a/environment.yml b/environment.yml
index ccca9c3..2caba8e 100644
--- a/environment.yml
+++ b/environment.yml
@@ -1,6 +1,6 @@
# You can use this file to create a conda environment for this pipeline:
# conda env create -f environment.yml
-name: nf-core-hic-1.2.2
+name: nf-core-hic-1.3dev
channels:
- conda-forge
- bioconda
diff --git a/nextflow.config b/nextflow.config
index 341e2a5..2cc0c22 100644
--- a/nextflow.config
+++ b/nextflow.config
@@ -80,7 +80,7 @@ params {
// Container slug. Stable releases should specify release tag!
// Developmental code should specify :dev
-process.container = 'nfcore/hic:1.2.2'
+process.container = 'nfcore/hic:dev'
// Load base.config by default for all pipelines
includeConfig 'conf/base.config'
@@ -153,7 +153,7 @@ manifest {
description = 'Analysis of Chromosome Conformation Capture data (Hi-C)'
mainScript = 'main.nf'
nextflowVersion = '>=19.10.0'
- version = '1.2.2'
+ version = '1.3dev'
}
// Function to ensure that resource requirements don't go beyond
--
GitLab