diff --git a/nextflow_schema.json b/nextflow_schema.json
index f888dbb16b5bd5f6e055d804a8d78e76be96079a..952fb4ab4349d331ad9a8f632db5f43b3ce59f33 100644
--- a/nextflow_schema.json
+++ b/nextflow_schema.json
@@ -279,6 +279,11 @@
                     "type": "string",
                     "default": "40000,20000",
                     "description": "Resolution to run TADs callers (comma separated)"
+                },
+                "res_compartments": {
+                    "type": "integer",
+                    "default": 250000,
+                    "description": "Resolution for compartments calling"
                 }
             }
         },
@@ -308,6 +313,10 @@
                     "description": "Do not run TADs calling",
                     "default": "False"
                 },
+                "skip_compartments": {
+                    "type": "string",
+                    "description": "Do not run compartments calling"
+                },
                 "skip_balancing": {
                     "type": "string",
                     "description": "Do not run cooler balancing normalization",