diff --git a/bin/check_samplesheet.py b/bin/check_samplesheet.py index d70498fccedfe0e83caf99b1b1e0f13d3be45dfa..17137e53b338a6a6a3e591ab1c71a5879c045994 100755 --- a/bin/check_samplesheet.py +++ b/bin/check_samplesheet.py @@ -124,8 +124,8 @@ class RowChecker: for row in self.modified: sample = row[self._sample_col] seen[sample] += 1 - if counts[sample] > 1: - row[self._sample_col] = f"{sample}_T{seen[sample]}" + #if counts[sample] > 1: + # row[self._sample_col] = f"{sample}_T{seen[sample]}" def sniff_format(handle): diff --git a/workflows/hic.nf b/workflows/hic.nf index f66e16d36b34c08e4149d15ec2bc290c17232626..e71e3e9b5366d08f65bd4e5b7ec446f9cb7a9f22 100644 --- a/workflows/hic.nf +++ b/workflows/hic.nf @@ -164,10 +164,10 @@ workflow HIC { ch_input ) .reads - .map { - meta, fastq -> - meta.id = meta.id.split('_')[0..-2].join('_') - [ meta, fastq ] } + //.map { + // meta, fastq -> + // meta.id = meta.id.split('_')[0..-2].join('_') + // [ meta, fastq ] } .groupTuple(by: [0]) .flatMap { it -> setMetaChunk(it) } .collate(2)