diff --git a/3_dimension_reduction/Makefile b/3_dimension_reduction/Makefile index de8fcb5ddbf7a74c0efced296afaf1c9badaf34d..1bdb44f6fd53f91cd4b19643ca20a7ee97f1c06b 100644 --- a/3_dimension_reduction/Makefile +++ b/3_dimension_reduction/Makefile @@ -1,4 +1,4 @@ -all: dimention_reduction.pdf +all: dimension_reduction.pdf -dimention_reduction.pdf: dimention_reduction.Rmd - Rscript -e "rmarkdown::render('dimention_reduction.Rmd')" +dimension_reduction.pdf: dimension_reduction.Rmd + Rscript -e "rmarkdown::render('dimension_reduction.Rmd')" diff --git a/5_pseudo_time/img/scvelo.png b/5_pseudo_time/img/scvelo.png new file mode 100644 index 0000000000000000000000000000000000000000..bcd2e93192c2d62a5dab6d420d637b971d76a775 Binary files /dev/null and b/5_pseudo_time/img/scvelo.png differ diff --git a/5_pseudo_time/pseudo_time.Rmd b/5_pseudo_time/pseudo_time.Rmd index 36b215b1ab9db226c93340e399d20fc25dd42cf0..ffd81d93b390cb35bcd0381201c1415483addc34 100644 --- a/5_pseudo_time/pseudo_time.Rmd +++ b/5_pseudo_time/pseudo_time.Rmd @@ -415,6 +415,16 @@ We can find the optime coupling between time $t_i$ and $t_{i+1}$ accounting for 259,155 cells collected at 39 time points across 18 days +# Velocity + +## Velocity + +\begin{center} + \href{https://scvelo.readthedocs.io/}{ + \includegraphics[width=0.7\textwidth]{img/scvelo.png} + } +\end{center} + ## Velocity