Verified Commit 429ee535 authored by Laurent Modolo's avatar Laurent Modolo
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4_clustering: update

parent 4549f1d8
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# Introduction
## Programme
## Program
1. Single-cell RNASeq data from 10X Sequencing (Friday 3 June 2022 - 14:00)
2. Normalization and spurious effects (Wednesday 8 June 2022 - 14:00)
3. Dimension reduction and data visualization (Monday 13 June 2022 - 15:00)
4. Clustering and annotation (Thursday 23 June 2022 - 14:00)
5. Pseudo-time and velocity inference (Thursday 30 June 2022 - 14:00)
6. Differental expression analysis (Friday 8 July 2022 - 14:00)
4. Clustering and annotation (Thursday 30 June 2022 2022 - 14:00)
5. Pseudo-time and velocity inference (Friday 8 July 2022 - 14:00)
6. Differential expression analysis (Monday 11 July 2022 - 15:30)
# Introduction
## Programme
## Program
1. Single-cell RNASeq data from 10X Sequencing (Friday 3 June 2022 - 14:00)
2. Normalization and spurious effects (Wednesday 8 June 2022 - 14:00)
3. Dimension reduction and data visualization (Monday 13 June 2022 - 15:00)
4. Clustering and annotation (Thursday 23 June 2022 - 14:00)
5. Pseudo-time and velocity inference (Thursday 30 June 2022 - 14:00)
4. Clustering and annotation (Thursday 30 June 2022 2022 - 14:00)
5. Pseudo-time and velocity inference (Friday 8 July 2022 - 14:00)
- Dimention reduction and pseudo-time
- Path Detection
- Cycle Detection
- Velocity
6. Differential expression analysis (Friday 8 July 2022 - 14:00)
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6. Differential expression analysis (Monday 11 July 2022 - 15:30)
# Continuous clustering
# Path detection
# Cycle detection
# Velocity
# single-cell RNA-Seq Differential expression analysis *Monday 11 July 2022*
# References
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......@@ -19,27 +19,33 @@ classoption: aspectratio=169
# Introduction
## Programme
## Program
1. Single-cell RNASeq data from 10X Sequencing (Friday 3 June 2022 - 14:00)
2. Normalization and spurious effects (Wednesday 8 June 2022 - 14:00)
3. Dimension reduction and data visualization (Monday 13 June 2022 - 15:00)
4. Clustering and annotation (Thursday 23 June 2022 - 14:00)
5. Pseudo-time and velocity inference (Thursday 30 June 2022 - 14:00)
6. Differental expression analysis (Friday 8 July 2022 - 14:00)
4. Clustering and annotation (Thursday 30 June 2022 2022 - 14:00)
5. Pseudo-time and velocity inference (Friday 8 July 2022 - 14:00)
6. Differential expression analysis (Monday 11 July 2022 - 15:30)
# Introduction
## Programme
## Program
1. Single-cell RNASeq data from 10X Sequencing (Friday 3 June 2022 - 14:00)
2. Normalization and spurious effects (Wednesday 8 June 2022 - 14:00)
3. Dimension reduction and data visualization (Monday 13 June 2022 - 15:00)
4. Clustering and annotation (Thursday 23 June 2022 - 14:00)
5. Pseudo-time and velocity inference (Thursday 30 June 2022 - 14:00)
6. Differential expression analysis (Friday 8 July 2022 - 14:00)
- Differential expression analysis between $2$ groups
- Multiple testing
- Between $n$ groups
4. Clustering and annotation (Thursday 30 June 2022 2022 - 14:00)
5. Pseudo-time and velocity inference (Friday 8 July 2022 - 14:00)
- Parametric versus non-parametric testing
- Differential expression analysis between groups
- Regression analysis
- Multiple testing
- Multivariate Differential expression analysis
6. Differential expression analysis (Monday 11 July 2022 - 15:30)
# Parametric versus non-parametric testing
# Differential expression analysis between groups
## Differential expression analysis between $2$ groups
## Between $n$ groups
# Regression analysis
# Multiple testing
# Multivariate Differential expression analysis
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