From c66c4777c787a778de6b0617f4b7ffa4fc6805d3 Mon Sep 17 00:00:00 2001
From: CLUET David <david.cluet@ens-lyon.fr>
Date: Mon, 8 Jul 2024 11:51:54 +0200
Subject: [PATCH] Start removing deprecating warnings.

---
 src/randomForest.R | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/src/randomForest.R b/src/randomForest.R
index f984453..526b602 100644
--- a/src/randomForest.R
+++ b/src/randomForest.R
@@ -325,7 +325,7 @@ table <- as_tibble(read.csv(db))
 #table <-table %>% filter(!is.infinite(!!sym(x1)))
 #table <- table %>% filter(!is.na(!!sym(x1)))
 
-
+colnames(table)
 
 table$deltaTDD_Lympho <- table$Abs.TDD..Lympho_Activated.Trip_CHX.Ref_Trip_0h.3h - table$Abs.TDD..Lympho_Resting.Trip_CHX.Ref_Trip_0h.3h
 table$deltaNonTDD_Lympho <- table$Abs.NonTDD..Lympho_Activated.Trip_CHX.Ref_Trip_0h.3h - table$Abs.NonTDD..Lympho_Resting.Trip_CHX.Ref_Trip_0h.3h
@@ -334,8 +334,8 @@ table$deltaRiboDens_Macro <- table$RiboDens.Macro_Activated - table$RiboDens.Mac
 table$deltaUTRlength_Lympho <- table$Exp_UTR3_Lympho_Activated_Mean - table$Exp_UTR3_Lympho_Resting_Mean
 table$deltaUTRlength_Macro <- table$Exp_UTR3_Macro_Activated_Mean - table$Exp_UTR3_Macro_Resting_Mean
 
-table$delta_TDD_new_Lympho <- table$Lympho_Activated.Abs_TDD_mean.3 - table$Lympho_Resting.Abs_TDD_mean.3
-table$delta_TID_new_Lympho <- table$Lympho_Activated.Abs_TID_mean.3 - table$Lympho_Resting.Abs_TID_mean.3
+# table$delta_TDD_new_Lympho <- table$Lympho_Activated.Abs_TDD_mean.3 - table$Lympho_Resting.Abs_TDD_mean.3
+# table$delta_TID_new_Lympho <- table$Lympho_Activated.Abs_TID_mean.3 - table$Lympho_Resting.Abs_TID_mean.3
 
 
 
-- 
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