From 872db5c0361d55108caa4e905633e5555cdc9cc3 Mon Sep 17 00:00:00 2001
From: elabaron <emmanuel.labaronne@ens-lyon.fr>
Date: Thu, 12 Nov 2020 13:08:02 +0100
Subject: [PATCH] fix urqt config
---
src/nf_modules/urqt/trimming_paired.config | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/nf_modules/urqt/trimming_paired.config b/src/nf_modules/urqt/trimming_paired.config
index f5ca8084..5e914eb6 100644
--- a/src/nf_modules/urqt/trimming_paired.config
+++ b/src/nf_modules/urqt/trimming_paired.config
@@ -21,7 +21,7 @@ profiles {
}
psmn{
singularity.enabled = true
- singularity.cacheDir = "/.singularity_psmn/"
+ singularity.cacheDir = "$baseDir/.singularity_psmn/"
singularity.runOptions = "--bind /Xnfs,/scratch"
process{
withName: trimming {
@@ -31,7 +31,7 @@ profiles {
memory = "5GB"
cpus = 32
time = "12h"
- queue = "CLG6242deb384A,CLG6242deb384C,CLG5218deb192A,CLG5218deb192B,CLG5218deb192C,CLG5218deb192D,SLG5118deb96,SLG6142deb384A,SLG6142deb384B,SLG6142deb384C,SLG6142deb384D"
+ queue = "CLG6242deb384A,CLG6242deb384C,CLG5218deb192A,CLG5218deb192B,CLG5218deb192C,CLG5218deb192D,SLG6142deb384A,SLG6142deb384B,SLG6142deb384C,SLG6142deb384D"
penv = "openmp32"
}
}
--
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