From 74568d960a32dc3a47caa20b56ae3ff4897b7076 Mon Sep 17 00:00:00 2001
From: Emmanuel Labaronne <emmanuel.labaronne@ens-lyon.fr>
Date: Thu, 19 Mar 2020 11:30:52 +0100
Subject: [PATCH] stringtie nf scripts : correct log.info
---
src/nf_modules/stringtie/transcriptome_longReads.nf | 2 +-
src/nf_modules/stringtie/transcriptome_shortReads.nf | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/nf_modules/stringtie/transcriptome_longReads.nf b/src/nf_modules/stringtie/transcriptome_longReads.nf
index e0ba8bd2..0952e328 100644
--- a/src/nf_modules/stringtie/transcriptome_longReads.nf
+++ b/src/nf_modules/stringtie/transcriptome_longReads.nf
@@ -1,6 +1,6 @@
params.bam = "$baseDir/data/bam/*.bam"
-log.info "fastq files : ${params.fastq}"
+log.info "fastq files : ${params.bam}"
Channel
.fromPath( params.bam )
diff --git a/src/nf_modules/stringtie/transcriptome_shortReads.nf b/src/nf_modules/stringtie/transcriptome_shortReads.nf
index 68ad9999..34002bbb 100644
--- a/src/nf_modules/stringtie/transcriptome_shortReads.nf
+++ b/src/nf_modules/stringtie/transcriptome_shortReads.nf
@@ -1,6 +1,6 @@
params.bam = "$baseDir/data/bam/*.bam"
-log.info "fastq files : ${params.fastq}"
+log.info "fastq files : ${params.bam}"
Channel
.fromPath( params.bam )
--
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