Skip to content
Snippets Groups Projects
Commit 65b98097 authored by elabaron's avatar elabaron
Browse files

RNAseq.config : correct penv config

parent bb620eb7
No related branches found
No related tags found
No related merge requests found
......@@ -17,7 +17,8 @@ profiles {
executor = "sge"
clusterOptions = "-cwd -V"
queue = 'CLG6242deb384A,CLG6242deb384C,CLG5218deb192A,CLG5218deb192B,CLG5218deb192C,CLG5218deb192D,SLG5118deb96,SLG6142deb384A,SLG6142deb384B,SLG6142deb384C,SLG6142deb384D'
penv = 'openmp32'
penv = 'openmp8'
cpus = 8
}
withName: hisat2_human {
beforeScript = "source $baseDir/.conda_psmn.sh"
......@@ -28,7 +29,7 @@ profiles {
cpus = 16
time = "12h"
queue = 'CLG6242deb384A,CLG6242deb384C,CLG5218deb192A,CLG5218deb192B,CLG5218deb192C,CLG5218deb192D,SLG5118deb96,SLG6142deb384A,SLG6142deb384B,SLG6142deb384C,SLG6142deb384D'
penv = 'openmp32'
penv = 'openmp16'
}
withName: sort_bam {
beforeScript = "source $baseDir/.conda_psmn.sh"
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Please to comment