diff --git a/CHANGELOG.md b/CHANGELOG.md index 17639ffb2fc348d4c2747576f42ecad6ae6b0aca..43ec4e433b23a3fbfd4ec2b2f6e1cb3ac2a28e2b 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -4,14 +4,78 @@ All notable changes to this project will be documented in this file. The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). -## [0.1.0] - 2018-08-22 +## [0.2.6] - 2018-08-23 +### Added +- Added `src/training_dataset.nf` to build a small training dataset from NGS data +### Changed +- the structure of `src/nf_modules`: the `tests` folder was removed + +## [0.2.5] - 2018-08-22 ### Added - This fine changelog ### Changed - the structure of `src/nf_modules`: the `tests` folder was removed + +## [0.2.4] - 2018-08-02 +### Changed +- add `paired_id` variable in the output of every single-end data processes to match the paired output + + +## [0.2.3] - 2018-07-25 +### Added +- List of tools available as nextflow, docker or sge module to the `README.md` + + +## [0.2.2] - 2018-07-23 +### Added +- SRA module from cigogne/nextflow-master 52b510e48daa1fb7 + + +## [0.2.1] - 2018-07-23 +### Added +- List of tools available as nextflow, docker or sge module + + +## [0.2.0] - 2018-06-18 +### Added +- `doc/TP_computational_biologists.md` +- Kallisto/0.44.0 + +### Changed +- add `paired_id` variable in the output of every paired data processes +- BEDtools: fixes for fasta handling +- UrQt: fix git version in Docker + + +## [0.1.2] - 2018-06-18 +### Added +- `doc/tp_experimental_biologist.md` and Makefile to build the pdf +- tests files for BEDtools + +### Changed +- Kallisto: various fixes +- UrQt: improve output and various fixes + ### Removed -- nothings +- `src/nf_test.config` modules have their own `.config` + + +## [0.1.2] - 2018-06-18 +### Added +- `doc/tp_experimental_biologist.md` and Makefile to build the pdf +- tests files for BEDtools + +### Changed +- Kallisto: various fixes +- UrQt: improve output and various fixes + +### Removed +- `src/nf_test.config` modules have their own `.config` + + +## [0.1.0] - 2018-05-06 +This is the first working version of the repository as a nextflow module repository