fexi_splitter issueshttps://gitbio.ens-lyon.fr/LBMC/RMI2/flexi_splitter/-/issues2023-09-26T10:14:36+02:00https://gitbio.ens-lyon.fr/LBMC/RMI2/flexi_splitter/-/issues/6Implement a progress bar2023-09-26T10:14:36+02:00elabaronImplement a progress barhttps://gitbio.ens-lyon.fr/LBMC/RMI2/flexi_splitter/-/issues/5Warning if length of barcode coord does not correspond to the lenght of the s...2023-09-25T15:35:34+02:00elabaronWarning if length of barcode coord does not correspond to the lenght of the sequenceJe pense que ce que tu devrais faire aussi, c'est un warning, indiquant que les positions du barcode sont incompatibles avec la séquence donnée dans le yml, ça pourrait aider l'utilisateur à vite fait comprendre qu'un truc cloche.Je pense que ce que tu devrais faire aussi, c'est un warning, indiquant que les positions du barcode sont incompatibles avec la séquence donnée dans le yml, ça pourrait aider l'utilisateur à vite fait comprendre qu'un truc cloche.https://gitbio.ens-lyon.fr/LBMC/RMI2/flexi_splitter/-/issues/4Make UMI optionnal2023-09-25T15:33:44+02:00elabaronMake UMI optionnalhttps://gitbio.ens-lyon.fr/LBMC/RMI2/flexi_splitter/-/issues/3Improve speed by using chunks2023-09-22T16:12:52+02:00elabaronImprove speed by using chunkshttps://gitbio.ens-lyon.fr/LBMC/RMI2/flexi_splitter/-/issues/2Make sample: section of the config file optional2021-04-27T14:48:47+02:00Laurent Modololaurent.modolo@ens-lyon.frMake sample: section of the config file optionalIf the sample: section of the config yaml file is missing for a given tag section, we want to output into as many directories as they are different sequences for the corresponding sequence position.If the sample: section of the config yaml file is missing for a given tag section, we want to output into as many directories as they are different sequences for the corresponding sequence position.https://gitbio.ens-lyon.fr/LBMC/RMI2/flexi_splitter/-/issues/1UMI in header2019-11-28T10:16:19+01:00elabaronUMI in headerwhen demultiplexing n-tuple files, the UMI is written only in the header of the read containing the UMI only. The consequence is that paired-end reads don't have anymore the same header, and mapping softwares can not handle this.when demultiplexing n-tuple files, the UMI is written only in the header of the read containing the UMI only. The consequence is that paired-end reads don't have anymore the same header, and mapping softwares can not handle this.