diff --git a/doc/2023_09_18_presentation.qmd b/doc/2023_09_18_presentation.qmd index fca8e36d335815fdaf295efd806aaf28364fd209..573719153b371509cafeb8e0f1c656abb0db9b23 100644 --- a/doc/2023_09_18_presentation.qmd +++ b/doc/2023_09_18_presentation.qmd @@ -48,7 +48,18 @@ From raw sequencing data of male and female individuals, we want to identify $k$ ## Phylogeny +:::: {.columns} +::: {.column width="40%"}  +::: + +::: {.column width="60%"} +- *M. belari* +- *M. monhystera* +- *M. longespiculosa* +- *M. spiculigera* +::: +:::: ## Kmer-diff @@ -372,4 +383,19 @@ A nextflow pipeline to analyze the $k$-mer content of fastq files 2. count the $k$-mers of each file 3. merge the counts to get a table of male and female $k$-mers counts 3. test the sexual models -4. identify the <span style="color:blue;">A</span>,<span style="color:red;">X</span> and <span style="color:green;">Y</span> $k$-mers \ No newline at end of file +4. identify the <span style="color:blue;">A</span>,<span style="color:red;">X</span> and <span style="color:green;">Y</span> $k$-mers + +## Phylogeny + +:::: {.columns} +::: {.column width="40%"} + +::: + +::: {.column width="60%"} +- *M. belari* <span style="color:blue;">A</span>,<span style="color:red;">X</span> and <span style="color:green;">Y</span> +- *M. monhystera* <span style="color:blue;">A</span> and <span style="color:green;">Y</span> +- *M. longespiculosa* <span style="color:blue;">A</span> +- *M. spiculigera* <span style="color:blue;">A</span>,<span style="color:red;">X</span> and <span style="color:green;">Y</span> +::: +:::: \ No newline at end of file diff --git a/doc/img/phylogeny.png b/doc/img/phylogeny.png new file mode 100644 index 0000000000000000000000000000000000000000..02e8afda19eb7cfe8825f56d21326b5d41c96cba Binary files /dev/null and b/doc/img/phylogeny.png differ