From a29a2832b8140dae4d2a0a4bc684a11408dcb6a5 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Thu, 7 Dec 2023 10:45:31 +0100
Subject: [PATCH] kmerclust_load.R: add dplyr dependency
---
src/bin/kmerclust_load.R | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/src/bin/kmerclust_load.R b/src/bin/kmerclust_load.R
index 3185e83..e7fcef1 100644
--- a/src/bin/kmerclust_load.R
+++ b/src/bin/kmerclust_load.R
@@ -1,4 +1,5 @@
library(kmerclust)
+library(dplyr)
library(vroom)
args <- commandArgs(trailingOnly = TRUE)
@@ -7,7 +8,7 @@ count <- vroom::vroom(
show_col_types = FALSE,
col_names = c("kmer", "count_m", "count_f"),
skip = 1) %>%
- mutate(
+ dplyr::mutate(
count_m = as.integer(count_m),
count_f = as.integer(count_f),
specie = as.factor(args[3])
--
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