From 86902b92692f419ad58b5d435ab64970b30b4130 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Tue, 28 Mar 2023 10:26:12 +0200
Subject: [PATCH] km_diff increase memory

---
 src/mbelari_diff.slurm         | 6 +++---
 src/mlongespiculosa_diff.slurm | 6 +++---
 src/mspiculigera_diff.slurm    | 6 +++---
 3 files changed, 9 insertions(+), 9 deletions(-)

diff --git a/src/mbelari_diff.slurm b/src/mbelari_diff.slurm
index 3f51bf3..7746259 100644
--- a/src/mbelari_diff.slurm
+++ b/src/mbelari_diff.slurm
@@ -3,8 +3,8 @@
 #SBATCH --output=%j.log   # Standard output et error log
 #SBATCH --time=2-00:00:00             # Délai max = 7 jours
 #SBATCH --ntasks=1
-#SBATCH --cpus-per-task=32
-#SBATCH --mem=128G
+#SBATCH --cpus-per-task=10
+#SBATCH --mem=200G
 #SBATCH --partition=Lake
 
 
@@ -14,4 +14,4 @@ KMDIFF="/Xnfs/abc/charliecloud_bin/ch-run -b /scratch /Xnfs/abc/charliecloud/img
 WORK=$(pwd)
 
 # kmdiff count
-${KMDIFF} diff -d ${WORK}/results/mbelari_counts/ -1 1 -2 1 -t 32 -o ${WORK}/results/mbelari_diff
+${KMDIFF} diff -d ${WORK}/results/mbelari_counts/ -1 1 -2 1 -t 10 -o ${WORK}/results/mbelari_diff
diff --git a/src/mlongespiculosa_diff.slurm b/src/mlongespiculosa_diff.slurm
index 2a3a758..d1ca275 100644
--- a/src/mlongespiculosa_diff.slurm
+++ b/src/mlongespiculosa_diff.slurm
@@ -3,8 +3,8 @@
 #SBATCH --output=%j.log   # Standard output et error log
 #SBATCH --time=2-00:00:00             # Délai max = 7 jours
 #SBATCH --ntasks=1
-#SBATCH --cpus-per-task=32
-#SBATCH --mem=128G
+#SBATCH --cpus-per-task=10
+#SBATCH --mem=200G
 #SBATCH --partition=Lake
 
 
@@ -14,4 +14,4 @@ KMDIFF="/Xnfs/abc/charliecloud_bin/ch-run -b /scratch /Xnfs/abc/charliecloud/img
 WORK=$(pwd)
 
 # kmdiff count
-${KMDIFF} diff -d ${WORK}/results/mlongespiculosa_counts/ -1 7 -2 2 -t 32 -o ${WORK}/results/mlongespiculosa_diff
+${KMDIFF} diff -d ${WORK}/results/mlongespiculosa_counts/ -1 7 -2 2 -t 10 -o ${WORK}/results/mlongespiculosa_diff
diff --git a/src/mspiculigera_diff.slurm b/src/mspiculigera_diff.slurm
index 8308f71..688a96e 100644
--- a/src/mspiculigera_diff.slurm
+++ b/src/mspiculigera_diff.slurm
@@ -4,8 +4,8 @@
 #SBATCH --output=%j.log   # Standard output et error log
 #SBATCH --time=2-00:00:00             # Délai max = 7 jours
 #SBATCH --ntasks=1
-#SBATCH --cpus-per-task=32
-#SBATCH --mem=128G
+#SBATCH --cpus-per-task=10
+#SBATCH --mem=200G
 #SBATCH --partition=Lake
 
 
@@ -15,4 +15,4 @@ KMDIFF="/Xnfs/abc/charliecloud_bin/ch-run -b /scratch /Xnfs/abc/charliecloud/img
 WORK=$(pwd)
 
 # kmdiff count
-${KMDIFF} diff -d ${WORK}/results/mspiculigera_counts/ -1 1 -2 1 -t 32 -o ${WORK}/results/mspiculigera_diff
+${KMDIFF} diff -d ${WORK}/results/mspiculigera_counts/ -1 1 -2 1 -t 10 -o ${WORK}/results/mspiculigera_diff
-- 
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