From 7bd66572da90c39842552bbdbffec939df1f71bb Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Tue, 23 May 2023 10:27:08 +0200
Subject: [PATCH] mergekmer.nf: add kmersize in the results path
---
src/modules/mergekmer.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/modules/mergekmer.nf b/src/modules/mergekmer.nf
index 1ecd27e..1737b6a 100644
--- a/src/modules/mergekmer.nf
+++ b/src/modules/mergekmer.nf
@@ -27,7 +27,7 @@ process MERGEKMER {
process COLLATEKMER {
tag "$specie"
label 'big_mem_mono_cpus'
- publishDir "results/${specie}/", mode: 'copy'
+ publishDir "results/${params.kmer_size}/${specie}/", mode: 'copy'
container "lbmc/mergekmer:0.1.2"
--
GitLab