diff --git a/src/main.nf b/src/main.nf index 68b34e3ac463079dcc59e603ab437acfb5579892..f8524d88429ce48dc0f15804c21b69497117c99f 100644 --- a/src/main.nf +++ b/src/main.nf @@ -17,7 +17,7 @@ Channel.fromPath( file(params.csv) ) fastq_r1 = file("${row.r1}") fastq_r2 = file("${row.r2}") r1: [['id': fastq_r1.simpleName, 'specie': row.specie, 'sex': row.sex, 'read': 'r1'], fastq_r1] - r2: [['id': fastq_r1.simpleName, 'specie': row.specie, 'sex': row.sex, 'read': 'r2'], fastq_r2] + r2: [['id': fastq_r2.simpleName, 'specie': row.specie, 'sex': row.sex, 'read': 'r2'], fastq_r2] } .set{ fastq }