diff --git a/src/main.nf b/src/main.nf index 1e27cd67acc90e3c21832dda8a03f9886298d63c..b10565cdcacee3d6b80981b5e4b4dfc81d43e0a0 100644 --- a/src/main.nf +++ b/src/main.nf @@ -4,7 +4,7 @@ nextflow.enable.dsl=2 Testing pipeline for marseq scRNASeq analysis */ -include { FASTKMERS } from "./modules/fastkmers.nf" +include { KMC } from "./modules/kmc.nf" Channel.fromPath( file(params.csv) ) @@ -18,5 +18,5 @@ Channel.fromPath( file(params.csv) ) .set{ fastq } workflow { - FASTKMERS(fastq.r1.mix(fastq.r2)) + KMC(fastq.r1.mix(fastq.r2)) }