From 065bb98a18b5edc4851e445e83f0f9da5b50b173 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Thu, 8 Jun 2023 15:01:45 +0200
Subject: [PATCH] update kmerclust version
---
src/bin/kmerclust.R | 1 +
src/modules/kmerclust.nf | 2 +-
2 files changed, 2 insertions(+), 1 deletion(-)
diff --git a/src/bin/kmerclust.R b/src/bin/kmerclust.R
index 31507a1..786f1dd 100644
--- a/src/bin/kmerclust.R
+++ b/src/bin/kmerclust.R
@@ -2,6 +2,7 @@ library(kmerclust)
library(ggplot2)
args <- commandArgs(trailingOnly = TRUE)
+print(args)
data <- readr::read_tsv(args[2], show_col_types = FALSE)
format(object.size(data), units = "Mb")
diff --git a/src/modules/kmerclust.nf b/src/modules/kmerclust.nf
index 9a9e51a..31e0fa5 100644
--- a/src/modules/kmerclust.nf
+++ b/src/modules/kmerclust.nf
@@ -2,7 +2,7 @@ process KMERCLUST {
tag "$specie"
label 'big_mem_multi_cpus'
- container "lbmc/kmerclust:0.0.1"
+ container "lbmc/kmerclust:0.0.2"
publishDir "results/${params.kmer_size}/${specie}/", mode: 'copy'
input:
--
GitLab