From a3e3cbb020462660708c30b94896f4f91e6342e0 Mon Sep 17 00:00:00 2001
From: elabaron <emmanuel.labaronne@ens-lyon.fr>
Date: Tue, 24 Jul 2018 18:17:04 +0200
Subject: [PATCH] fastqc.nf : don't save each report in a new folder
---
src/nf_modules/FastQC/fastqc.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/nf_modules/FastQC/fastqc.nf b/src/nf_modules/FastQC/fastqc.nf
index ad69925..abe18a4 100644
--- a/src/nf_modules/FastQC/fastqc.nf
+++ b/src/nf_modules/FastQC/fastqc.nf
@@ -16,7 +16,7 @@ Channel
process fastqc {
tag "$fastq.baseName"
- publishDir "results/fasqc/${fastq.baseName}/", mode: 'copy'
+ publishDir "results/fastqc/", mode: 'copy'
input:
file fastq from fastq_files
--
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