From 3d96bc3357d7b9904b678f4eaccfa8b136db392e Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Mon, 18 Jun 2018 17:14:38 +0200
Subject: [PATCH] kallisto.config: update to the last kallisto version
---
src/nf_modules/Kallisto/kallisto.config | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/src/nf_modules/Kallisto/kallisto.config b/src/nf_modules/Kallisto/kallisto.config
index 1a92bb1..da7f54e 100644
--- a/src/nf_modules/Kallisto/kallisto.config
+++ b/src/nf_modules/Kallisto/kallisto.config
@@ -4,17 +4,17 @@ profiles {
docker.enabled = true
process {
$index_fasta {
- container = "kallisto:0.43.1"
+ container = "kallisto:0.44.0"
}
$mapping_fastq {
- container = "kallisto:0.43.1"
+ container = "kallisto:0.44.0"
}
}
}
sge {
process{
$index_fasta {
- beforeScript = "module purge; module load Kallisto/0.43.1"
+ beforeScript = "module purge; module load Kallisto/0.44.0"
executor = "sge"
cpus = 1
memory = "5GB"
@@ -25,7 +25,7 @@ profiles {
penv = 'openmp8'
}
$mapping_fastq {
- beforeScript = "module purge; module load Kallisto/0.43.1"
+ beforeScript = "module purge; module load Kallisto/0.44.0"
executor = "sge"
cpus = 4
memory = "5GB"
--
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